ASRP- Arabidopsis Small RNA Project Database | Tool name | ASRP- Arabidopsis Small RNA Project Database |
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| URL | http://asrp.cgrb.oregonstate.edu |
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| Important features | Serves as a repository for small RNA sequences cloned from several Arabidopsis genotypes and tissues.
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| Citations | Gustafson AM, Allen E, Givan S, Smith D, Carrington JC, Kasschau KD. ASRP: the
Arabidopsis Small RNA Project Database. Nucleic Acids Res. 2005 Jan 1;33(Database
issue):D637-40. PubMed PMID: 15608278
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| Year of publication | 2005 |
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| Rank by usage frequency | 100 |
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| Comments | Currently a major part of ASRP data is available at the Arabidopsis small RNA database maintained by Blake Meyers and Pamela Green |
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| Function | SPECIES: plant, BROAD SCOPE RESOURCES: non coding RNA, http://asrp.cgrb.oregonstate.edu, Serves as a repository for small RNA sequences cloned from several Arabidopsis genotypes and tissues.
, Gustafson AM- Allen E- Givan S- Smith D- Carrington JC- Kasschau KD. ASRP: the
Arabidopsis Small RNA Project Database. Nucleic Acids Res. 2005 Jan 1;33(Database
issue):D637-40. PubMed PMID: 15608278
, 2005, 100, Currently a major part of ASRP data is available at the Arabidopsis small RNA database maintained by Blake Meyers and Pamela Green, Online, 1. SPECIES SUPPORTED INCLUDE: Arabidopsis thaliana II. QUERY OR INPUT DATA: search by keywords- genome coordinates or sequences III. RESULTS INCLUDE: details of microRNA- tasiRNA- sequence(s)- gene(s) (depends on the type of analysis chosen). IV. ADDITIONAL INFORMATION: Two tools available for download are 1. CASHX and TargetFinder, Determine protein coding and non transcripts., 3.5 FUNCTIONAL ANALYSIS: protein coding and non coding transcripts |
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